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Chris van Run

Bioinformatics analyst
  • Kemmeren group
Chris van Run

Development of NGS QC and analysis pipelines

Next-generation sequencing data requires next-generation analysis pipelines in order to transform large, raw sequencing data files into a diagnosis or analysis report. The pipelines we build consist of cleanly stitching together software on the level of RESTful APIs, databases and infrastructure. Where needed we extend open-source software to suit our needs. One such software is MultiQC; it aggregate results from bioinformatics quality-checks across many samples into a single report.